GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| THYM | cis | rs2243480 | 1 | rs316304 | chr7:65616894 | CCT6P1 | chr7:65216092-65228661:+ | 0.65 | 5.41 | 4.64E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316307 | chr7:65570171 | CCT6P1 | chr7:65216092-65228661:+ | 0.65 | 5.41 | 4.64E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316312 | chr7:65596491 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316313 | chr7:65593548 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316315 | chr7:65591205 | CCT6P1 | chr7:65216092-65228661:+ | -0.53 | -5.37 | 5.57E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316317 | chr7:65613637 | CCT6P1 | chr7:65216092-65228661:+ | 0.65 | 5.41 | 4.64E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316318 | chr7:65612904 | CCT6P1 | chr7:65216092-65228661:+ | 0.65 | 5.41 | 4.64E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316321 | chr7:65611613 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316322 | chr7:65611233 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316325 | chr7:65609518 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316326 | chr7:65609453 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316327 | chr7:65609201 | CCT6P1 | chr7:65216092-65228661:+ | -0.64 | -5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316329 | chr7:65608416 | CCT6P1 | chr7:65216092-65228661:+ | 0.64 | 5.31 | 7.1E-7 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316330 | chr7:65605372 | CCT6P1 | chr7:65216092-65228661:+ | 0.59 | 4.33 | 3.73E-5 | Diabetic kidney disease |
| THYM | cis | rs2243480 | 1 | rs316331 | chr7:65604622 | CCT6P1 | chr7:65216092-65228661:+ | -0.64 | -5.31 | 7.1E-7 | Diabetic kidney disease |